Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Gm39288-201ENSMUST00000210554 446 ntBASIC12.69□□□□□ -0.38
Vps53Q8CCB4 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.69□□□□□ -0.38
Vps53Q8CCB4 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm15003-201ENSMUST00000118884 446 ntBASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm9673-201ENSMUST00000119287 781 ntBASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm11979-201ENSMUST00000119629 743 ntBASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm14993-201ENSMUST00000121180 164 ntBASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm17214-201ENSMUST00000164501 541 ntBASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm21778-201ENSMUST00000178779 471 ntBASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm37284-201ENSMUST00000193607 539 ntBASIC12.68□□□□□ -0.38
Vps53Q8CCB4 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Vps53Q8CCB4 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vps53Q8CCB4 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms