Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Gm13035-201ENSMUST00000117496 342 ntBASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Gm13809-201ENSMUST00000117921 597 ntBASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Gm11956-201ENSMUST00000119525 512 ntBASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 AC159103.1-201ENSMUST00000228325 429 ntBASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Gm10020-201ENSMUST00000081993 612 ntBASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Gm13104-201ENSMUST00000119651 1446 ntBASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Lysmd4Q8CC84 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm15615-201ENSMUST00000118876 198 ntBASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm15554-201ENSMUST00000120406 913 ntBASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm14277-201ENSMUST00000121195 360 ntBASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gstp-ps-201ENSMUST00000195526 631 ntBASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Phtf1os-201ENSMUST00000160110 4046 ntBASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Lysmd4Q8CC84 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms