Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Gm24791-201ENSMUST00000104284 131 ntBASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Gm11919-201ENSMUST00000117609 721 ntBASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Gm12397-201ENSMUST00000117674 615 ntBASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Gm13549-201ENSMUST00000118339 796 ntBASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Gm12783-201ENSMUST00000121425 397 ntBASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Gm17214-201ENSMUST00000164501 541 ntBASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Gm5543-201ENSMUST00000193329 1091 ntBASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Gm43564-201ENSMUST00000196185 211 ntBASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Gm7319-201ENSMUST00000210047 778 ntBASIC12.63□□□□□ -0.39
Alx1Q8C8B0 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Alx1Q8C8B0 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gm37160-201ENSMUST00000193081 1689 ntBASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gm13039-201ENSMUST00000118638 794 ntBASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gm42780-201ENSMUST00000197083 734 ntBASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gm5881-201ENSMUST00000204737 367 ntBASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gm32111-201ENSMUST00000207689 846 ntBASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gm31941-201ENSMUST00000209689 350 ntBASIC12.62□□□□□ -0.39
Alx1Q8C8B0 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Mir194-2-201ENSMUST00000083648 86 ntBASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 AA474408-201ENSMUST00000098110 3339 ntBASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Alx1Q8C8B0 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.61□□□□□ -0.39
Alx1Q8C8B0 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms