Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim9Q8C7M3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Gm12030-201ENSMUST00000121917 223 ntBASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Gm3726-201ENSMUST00000203110 785 ntBASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Gm18466-201ENSMUST00000209147 499 ntBASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Trim9Q8C7M3 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm15554-201ENSMUST00000120406 913 ntBASIC11.93□□□□□ -0.5
Trim9Q8C7M3 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm5529-201ENSMUST00000165691 891 ntBASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm4812-201ENSMUST00000182847 993 ntBASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm29410-201ENSMUST00000188383 694 ntBASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.93□□□□□ -0.5
Trim9Q8C7M3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm44551-201ENSMUST00000208804 171 ntBASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm8255-201ENSMUST00000218693 305 ntBASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.93□□□□□ -0.5
Trim9Q8C7M3 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim9Q8C7M3 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim9Q8C7M3 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms