Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Mir432-201ENSMUST00000157230 75 ntBASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
4933409G03RikQ8C5U0 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Gm12028-201ENSMUST00000118065 436 ntBASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Gm6425-201ENSMUST00000136332 790 ntBASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Gm6677-201ENSMUST00000195100 441 ntBASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
4933409G03RikQ8C5U0 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm23595-201ENSMUST00000104306 130 ntBASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm12418-201ENSMUST00000118116 942 ntBASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm5764-201ENSMUST00000118817 885 ntBASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm8019-201ENSMUST00000119317 587 ntBASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm5555-201ENSMUST00000120352 1111 ntBASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm8384-201ENSMUST00000190905 704 ntBASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm37207-201ENSMUST00000194284 296 ntBASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Gm42803-201ENSMUST00000201051 451 ntBASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
4933409G03RikQ8C5U0 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms