Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Gm25661-201ENSMUST00000157704 296 ntBASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Gm44551-201ENSMUST00000208804 171 ntBASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Gm10263-201ENSMUST00000085163 300 ntBASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 AC131029.1-201ENSMUST00000226391 2929 ntBASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rad54bQ6PFE3 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Id2-203ENSMUST00000222667 958 ntBASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Mir433-201ENSMUST00000093564 124 ntBASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Gm21115-201ENSMUST00000187565 2578 ntBASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rad54bQ6PFE3 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Gm15554-201ENSMUST00000120406 913 ntBASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Gm3828-201ENSMUST00000121817 257 ntBASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rad54bQ6PFE3 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms