Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Gm8684-201ENSMUST00000195078 1564 ntBASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 AC153524.2-202ENSMUST00000220401 1794 ntBASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Vps54Q5SPW0 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Gm25880-201ENSMUST00000104331 132 ntBASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Gm5764-201ENSMUST00000118817 885 ntBASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Gm9162-201ENSMUST00000182081 991 ntBASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Gm43969-201ENSMUST00000204833 535 ntBASIC13.01□□□□□ -0.33
Vps54Q5SPW0 AC154361.2-201ENSMUST00000224747 943 ntBASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Mir483-201ENSMUST00000093631 73 ntBASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vps54Q5SPW0 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vps54Q5SPW0 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm28624-201ENSMUST00000186430 2131 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm14005-210ENSMUST00000225087 1413 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm24791-201ENSMUST00000104284 131 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm13549-201ENSMUST00000118339 796 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm15136-201ENSMUST00000120552 533 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm15196-201ENSMUST00000121406 482 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm12783-201ENSMUST00000121425 397 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC13□□□□□ -0.33
Vps54Q5SPW0 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Vps54Q5SPW0 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 n-R5s130-201ENSMUST00000178128 119 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm24312-201ENSMUST00000178677 119 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 n-R5s106-201ENSMUST00000179060 119 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 n-R5s118-201ENSMUST00000179887 119 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Gm43460-201ENSMUST00000202491 1057 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 AC124581.2-201ENSMUST00000225459 282 ntBASIC13□□□□□ -0.33
Vps54Q5SPW0 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vps54Q5SPW0 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vps54Q5SPW0 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Vps54Q5SPW0 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vps54Q5SPW0 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms