Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm43097-201ENSMUST00000196867 151 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.65□□□□□ -0.38
Rc3h1Q4VGL6 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rc3h1Q4VGL6 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Gm5244-201ENSMUST00000164001 339 ntBASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Ighv5-8-202ENSMUST00000191967 337 ntBASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rc3h1Q4VGL6 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm11475-201ENSMUST00000118482 476 ntBASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm8451-201ENSMUST00000170338 447 ntBASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm37002-201ENSMUST00000194560 373 ntBASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm42751-201ENSMUST00000198065 559 ntBASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm8162-201ENSMUST00000213951 665 ntBASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Prl7a1-203ENSMUST00000224852 1283 ntBASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm26782-203ENSMUST00000227103 751 ntBASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Gm5453-201ENSMUST00000080866 447 ntBASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rc3h1Q4VGL6 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms