Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Gm9133-201ENSMUST00000118289 540 ntBASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Gm26134-201ENSMUST00000178484 110 ntBASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Gm9358-201ENSMUST00000183067 927 ntBASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.55□□□□□ -0.56
Syne3Q4FZC9 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Gm42816-201ENSMUST00000198433 325 ntBASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.55□□□□□ -0.56
Syne3Q4FZC9 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.55□□□□□ -0.56
Syne3Q4FZC9 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Syne3Q4FZC9 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Gm45828-201ENSMUST00000206938 1836 ntBASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Gm42518-201ENSMUST00000196277 938 ntBASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Gm29787-201ENSMUST00000222129 849 ntBASIC11.54□□□□□ -0.56
Syne3Q4FZC9 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.54□□□□□ -0.56
Syne3Q4FZC9 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Syne3Q4FZC9 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Gm5599-201ENSMUST00000209602 788 ntBASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.53□□□□□ -0.56
Syne3Q4FZC9 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Syne3Q4FZC9 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms