Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm14153-201ENSMUST00000119923 1139 ntBASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm12136-201ENSMUST00000120460 1209 ntBASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm14524-201ENSMUST00000121066 683 ntBASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm24346-201ENSMUST00000158712 194 ntBASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm28391-201ENSMUST00000185202 379 ntBASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm29528-201ENSMUST00000186699 379 ntBASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm29526-201ENSMUST00000187217 379 ntBASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm26440-201ENSMUST00000082591 129 ntBASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm14538-201ENSMUST00000122019 1327 ntBASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Gm44663-201ENSMUST00000206898 3150 ntBASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Rffl-201ENSMUST00000021036 1719 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sf3b2Q3UJB0 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm4925-202ENSMUST00000168843 1561 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm12397-201ENSMUST00000117674 615 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm8163-201ENSMUST00000122020 1060 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm11715-201ENSMUST00000129501 695 ntTSL 2 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm22994-201ENSMUST00000175422 82 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm27149-201ENSMUST00000184716 1266 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm43667-201ENSMUST00000198616 1095 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm34248-201ENSMUST00000200027 474 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm8557-201ENSMUST00000220777 475 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Gm3379-201ENSMUST00000222259 642 ntBASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sf3b2Q3UJB0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Gm23899-201ENSMUST00000158112 90 ntBASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC14.05□□□□□ -0.16
Sf3b2Q3UJB0 Gm26611-201ENSMUST00000181449 785 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms