Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cnbd2-203ENSMUST00000109580 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Adora3-201ENSMUST00000000574 2370 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Phf21a-208ENSMUST00000111294 3710 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Serping1-202ENSMUST00000111641 1665 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm38056-201ENSMUST00000193928 5027 ntBASIC8.87□□□□□ -0.99
Trim63Q38HM4 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC8.87□□□□□ -0.99
Trim63Q38HM4 Olfr601-202ENSMUST00000210431 2266 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Gm12059-201ENSMUST00000128996 3105 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Rtp1-201ENSMUST00000038730 3120 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Ccrl2-201ENSMUST00000111888 2459 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Cfap58-201ENSMUST00000066308 3345 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim63Q38HM4 Kcna4-201ENSMUST00000037012 4792 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Vps8-204ENSMUST00000117598 4935 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Dennd1b-202ENSMUST00000168527 8206 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 AC123832.1-201ENSMUST00000214120 2371 ntBASIC8.86□□□□□ -0.99
Trim63Q38HM4 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Gm3287-205ENSMUST00000228893 1332 ntBASIC8.86□□□□□ -0.99
Trim63Q38HM4 Gm10741-201ENSMUST00000218151 1748 ntBASIC8.86□□□□□ -0.99
Trim63Q38HM4 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Plekho2-201ENSMUST00000068944 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Gm20775-201ENSMUST00000100115 1851 ntBASIC8.86□□□□□ -0.99
Trim63Q38HM4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Gm2231-201ENSMUST00000125661 612 ntBASIC8.86□□□□□ -0.99
Trim63Q38HM4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Insig2-208ENSMUST00000160968 1204 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Gm27441-201ENSMUST00000185000 105 ntBASIC8.86□□□□□ -0.99
Trim63Q38HM4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Gm31941-201ENSMUST00000209689 350 ntBASIC8.86□□□□□ -0.99
Trim63Q38HM4 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Gm9797-201ENSMUST00000052902 613 ntBASIC8.86□□□□□ -0.99
Trim63Q38HM4 Gm20445-201ENSMUST00000061905 565 ntBASIC8.86□□□□□ -0.99
Trim63Q38HM4 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 9030619P08Rik-201ENSMUST00000096397 857 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Olfr1532-ps1-203ENSMUST00000215949 2439 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Mbnl3-201ENSMUST00000041495 1803 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Upp2-203ENSMUST00000102755 1632 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 CT010447.1-201ENSMUST00000225657 1608 ntBASIC8.86□□□□□ -0.99
Trim63Q38HM4 Abca8a-202ENSMUST00000100287 5619 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Abca8a-204ENSMUST00000106664 5617 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Slc9b2-201ENSMUST00000051849 4818 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Slc22a21-201ENSMUST00000076493 3461 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Atg13-201ENSMUST00000028678 3604 ntTSL 5 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Dpy19l2-201ENSMUST00000133010 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Trim63Q38HM4 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Parpbp-201ENSMUST00000048518 3594 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trim63Q38HM4 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm37567-201ENSMUST00000193241 2279 ntBASIC8.85□□□□□ -0.99
Trim63Q38HM4 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 AC165260.6-204ENSMUST00000225571 3508 ntBASIC8.85□□□□□ -0.99
Trim63Q38HM4 Akt2-204ENSMUST00000108343 3122 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Disp2-203ENSMUST00000110843 2949 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim63Q38HM4 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms