Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.77□□□□□ -0.53
Col9a2Q07643 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.77□□□□□ -0.53
Col9a2Q07643 Gm18001-201ENSMUST00000212023 688 ntBASIC11.77□□□□□ -0.53
Col9a2Q07643 AC154585.1-201ENSMUST00000218917 997 ntBASIC11.77□□□□□ -0.53
Col9a2Q07643 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC11.77□□□□□ -0.53
Col9a2Q07643 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 AC134860.2-201ENSMUST00000225277 1036 ntBASIC11.77□□□□□ -0.53
Col9a2Q07643 Gm5453-201ENSMUST00000080866 447 ntBASIC11.77□□□□□ -0.53
Col9a2Q07643 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Col9a2Q07643 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.77□□□□□ -0.53
Col9a2Q07643 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Col9a2Q07643 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.77□□□□□ -0.53
Col9a2Q07643 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.77□□□□□ -0.53
Col9a2Q07643 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.77□□□□□ -0.53
Col9a2Q07643 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Col9a2Q07643 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.77□□□□□ -0.53
Col9a2Q07643 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Col9a2Q07643 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC11.77□□□□□ -0.53
Col9a2Q07643 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a2Q07643 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.76□□□□□ -0.53
Col9a2Q07643 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.76□□□□□ -0.53
Col9a2Q07643 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm12397-201ENSMUST00000117674 615 ntBASIC11.76□□□□□ -0.53
Col9a2Q07643 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm26208-201ENSMUST00000158677 124 ntBASIC11.76□□□□□ -0.53
Col9a2Q07643 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.76□□□□□ -0.53
Col9a2Q07643 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm45094-201ENSMUST00000207013 617 ntBASIC11.76□□□□□ -0.53
Col9a2Q07643 AC158388.3-202ENSMUST00000225517 775 ntBASIC11.76□□□□□ -0.53
Col9a2Q07643 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.76□□□□□ -0.53
Col9a2Q07643 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a2Q07643 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col9a2Q07643 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.75□□□□□ -0.53
Col9a2Q07643 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Col9a2Q07643 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.75□□□□□ -0.53
Col9a2Q07643 Gm12337-201ENSMUST00000119634 400 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms