Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm5513-201ENSMUST00000072982 1218 ntBASIC13.64□□□□□ -0.23
Nkx2-3P97334 Gm25125-201ENSMUST00000083340 136 ntBASIC13.64□□□□□ -0.23
Nkx2-3P97334 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-3P97334 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Nkx2-3P97334 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-3P97334 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-3P97334 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-3P97334 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-3P97334 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-3P97334 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-3P97334 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.64□□□□□ -0.23
Nkx2-3P97334 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-3P97334 Gm6783-201ENSMUST00000120916 1437 ntBASIC13.64□□□□□ -0.23
Nkx2-3P97334 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Nkx2-3P97334 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nkx2-3P97334 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx2-3P97334 AC124561.1-202ENSMUST00000228652 1929 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm22751-201ENSMUST00000102077 109 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Mir692-3-201ENSMUST00000102079 109 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Mir692-2-201ENSMUST00000102081 109 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Snora68-201ENSMUST00000104375 131 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm13505-201ENSMUST00000121666 817 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm24943-201ENSMUST00000158329 433 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm37858-201ENSMUST00000192759 1231 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm38188-201ENSMUST00000192879 856 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm38038-201ENSMUST00000193803 259 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm38233-201ENSMUST00000194259 807 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm43811-201ENSMUST00000202862 695 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm44540-201ENSMUST00000205640 354 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm7904-201ENSMUST00000217049 465 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 AC154461.1-201ENSMUST00000224207 1005 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Gm3372-201ENSMUST00000198806 1792 ntBASIC13.63□□□□□ -0.23
Nkx2-3P97334 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nkx2-3P97334 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC13.62□□□□□ -0.23
Nkx2-3P97334 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Gm12570-201ENSMUST00000122047 1030 ntBASIC13.62□□□□□ -0.23
Nkx2-3P97334 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Gm5976-201ENSMUST00000180794 996 ntBASIC13.62□□□□□ -0.23
Nkx2-3P97334 Gm28391-201ENSMUST00000185202 379 ntBASIC13.62□□□□□ -0.23
Nkx2-3P97334 Gm29528-201ENSMUST00000186699 379 ntBASIC13.62□□□□□ -0.23
Nkx2-3P97334 Gm29526-201ENSMUST00000187217 379 ntBASIC13.62□□□□□ -0.23
Nkx2-3P97334 AC124613.1-201ENSMUST00000198711 88 ntBASIC13.62□□□□□ -0.23
Nkx2-3P97334 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
Nkx2-3P97334 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC13.62□□□□□ -0.23
Nkx2-3P97334 Arhgef33-207ENSMUST00000224966 490 ntBASIC13.62□□□□□ -0.23
Nkx2-3P97334 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms