Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nup43P59235 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.28□□□□□ -0.76
Nup43P59235 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nup43P59235 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Gm5529-201ENSMUST00000165691 891 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Mir3547-201ENSMUST00000175461 88 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Gm9135-201ENSMUST00000182963 990 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Mir8091-201ENSMUST00000183602 139 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Gm37293-201ENSMUST00000191658 295 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Gm19080-201ENSMUST00000196082 550 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Gm40414-201ENSMUST00000197608 481 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.28□□□□□ -0.76
Nup43P59235 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.28□□□□□ -0.76
Nup43P59235 Gm33080-201ENSMUST00000205429 172 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Gm3619-201ENSMUST00000219947 775 ntBASIC10.28□□□□□ -0.76
Nup43P59235 AC154757.2-201ENSMUST00000228885 743 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nup43P59235 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Nup43P59235 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Gm7589-201ENSMUST00000085631 534 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nup43P59235 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Nup43P59235 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.28□□□□□ -0.76
Nup43P59235 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Nup43P59235 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.28□□□□□ -0.76
Nup43P59235 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Nup43P59235 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nup43P59235 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nup43P59235 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.27□□□□□ -0.76
Nup43P59235 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Nup43P59235 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.27□□□□□ -0.77
Nup43P59235 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.27□□□□□ -0.77
Nup43P59235 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.27□□□□□ -0.77
Nup43P59235 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC10.27□□□□□ -0.77
Nup43P59235 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.27□□□□□ -0.77
Nup43P59235 Gm13183-201ENSMUST00000118615 789 ntBASIC10.27□□□□□ -0.77
Nup43P59235 Gm11422-201ENSMUST00000118925 1103 ntBASIC10.27□□□□□ -0.77
Nup43P59235 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.27□□□□□ -0.77
Nup43P59235 Mir1905-201ENSMUST00000122779 82 ntBASIC10.27□□□□□ -0.77
Nup43P59235 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC10.27□□□□□ -0.77
Nup43P59235 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 AC238811.4-201ENSMUST00000178019 1246 ntBASIC10.27□□□□□ -0.77
Nup43P59235 AC238940.3-201ENSMUST00000178830 1246 ntBASIC10.27□□□□□ -0.77
Nup43P59235 Gm26976-201ENSMUST00000182929 908 ntBASIC10.27□□□□□ -0.77
Nup43P59235 Gm7985-201ENSMUST00000183329 981 ntBASIC10.27□□□□□ -0.77
Nup43P59235 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Nup43P59235 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.27□□□□□ -0.77
Nup43P59235 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Gm18968-201ENSMUST00000221319 862 ntBASIC10.27□□□□□ -0.77
Nup43P59235 AC158392.3-201ENSMUST00000224271 1284 ntBASIC10.27□□□□□ -0.77
Nup43P59235 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Nup43P59235 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
Nup43P59235 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Gm16380-201ENSMUST00000077997 478 ntBASIC10.27□□□□□ -0.77
Nup43P59235 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.27□□□□□ -0.77
Nup43P59235 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Nup43P59235 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms