Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Tpm1P58771 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Gm22323-201ENSMUST00000103832 109 ntBASIC12.06□□□□□ -0.48
Tpm1P58771 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tpm1P58771 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.06□□□□□ -0.48
Tpm1P58771 Gm14127-201ENSMUST00000117906 678 ntBASIC12.06□□□□□ -0.48
Tpm1P58771 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.06□□□□□ -0.48
Tpm1P58771 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tpm1P58771 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tpm1P58771 Gm7783-201ENSMUST00000204795 781 ntBASIC12.06□□□□□ -0.48
Tpm1P58771 Gm44506-201ENSMUST00000206278 965 ntBASIC12.06□□□□□ -0.48
Tpm1P58771 Gm17825-201ENSMUST00000206836 794 ntBASIC12.06□□□□□ -0.48
Tpm1P58771 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC12.06□□□□□ -0.48
Tpm1P58771 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.06□□□□□ -0.48
Tpm1P58771 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.06□□□□□ -0.48
Tpm1P58771 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC12.06□□□□□ -0.48
Tpm1P58771 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC12.06□□□□□ -0.48
Tpm1P58771 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tpm1P58771 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tpm1P58771 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tpm1P58771 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 AC156802.2-203ENSMUST00000226032 1906 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tpm1P58771 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Tpm1P58771 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.05□□□□□ -0.48
Tpm1P58771 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Daam1-201ENSMUST00000085299 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.05□□□□□ -0.48
Tpm1P58771 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.05□□□□□ -0.48
Tpm1P58771 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tpm1P58771 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tpm1P58771 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Gm14592-201ENSMUST00000117201 560 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 Gm8302-201ENSMUST00000119217 852 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Gm17376-201ENSMUST00000166016 84 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 Gm37259-201ENSMUST00000193903 849 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.05□□□□□ -0.48
Tpm1P58771 CT025602.2-201ENSMUST00000226553 772 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tpm1P58771 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tpm1P58771 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Gm7103-201ENSMUST00000195642 1852 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 AC121870.2-201ENSMUST00000214343 1870 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 AC160340.2-201ENSMUST00000220812 3675 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tpm1P58771 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.05□□□□□ -0.48
Tpm1P58771 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.05□□□□□ -0.48
Tpm1P58771 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tpm1P58771 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tpm1P58771 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.04□□□□□ -0.48
Tpm1P58771 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Tpm1P58771 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tpm1P58771 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.04□□□□□ -0.48
Tpm1P58771 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms