Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.36□□□□□ -0.75
Cdkn2bP55271 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.36□□□□□ -0.75
Cdkn2bP55271 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Cdh18-207ENSMUST00000226693 2165 ntBASIC10.35□□□□□ -0.75
Cdkn2bP55271 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm12165-201ENSMUST00000117047 342 ntBASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm11949-201ENSMUST00000117640 372 ntBASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm12663-201ENSMUST00000118481 958 ntBASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm13045-201ENSMUST00000119019 712 ntBASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm5244-201ENSMUST00000164001 339 ntBASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm8197-202ENSMUST00000193422 934 ntBASIC10.35□□□□□ -0.75
Cdkn2bP55271 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.35□□□□□ -0.75
Cdkn2bP55271 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Cux1-207ENSMUST00000176216 2821 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.35□□□□□ -0.75
Cdkn2bP55271 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdkn2bP55271 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cdkn2bP55271 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.35□□□□□ -0.75
Cdkn2bP55271 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.34□□□□□ -0.75
Cdkn2bP55271 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cdkn2bP55271 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.34□□□□□ -0.75
Cdkn2bP55271 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Mir1893-201ENSMUST00000122565 83 ntBASIC10.34□□□□□ -0.75
Cdkn2bP55271 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Gm16165-201ENSMUST00000160140 795 ntBASIC10.34□□□□□ -0.75
Cdkn2bP55271 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.34□□□□□ -0.75
Cdkn2bP55271 Gm19353-201ENSMUST00000184561 445 ntBASIC10.34□□□□□ -0.75
Cdkn2bP55271 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cdkn2bP55271 AC154171.1-201ENSMUST00000224610 643 ntBASIC10.34□□□□□ -0.75
Cdkn2bP55271 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.34□□□□□ -0.75
Cdkn2bP55271 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.34□□□□□ -0.75
Cdkn2bP55271 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdkn2bP55271 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms