Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NrlP54846 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.6□□□□□ -0.55
NrlP54846 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.59□□□□□ -0.55
NrlP54846 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
NrlP54846 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.59□□□□□ -0.55
NrlP54846 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
NrlP54846 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC11.59□□□□□ -0.55
NrlP54846 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
NrlP54846 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.59□□□□□ -0.55
NrlP54846 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
NrlP54846 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
NrlP54846 Gm12745-201ENSMUST00000121767 214 ntBASIC11.59□□□□□ -0.55
NrlP54846 Gm25288-201ENSMUST00000122800 265 ntBASIC11.59□□□□□ -0.55
NrlP54846 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.59□□□□□ -0.55
NrlP54846 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.59□□□□□ -0.55
NrlP54846 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.59□□□□□ -0.55
NrlP54846 Gm7627-201ENSMUST00000183205 999 ntBASIC11.59□□□□□ -0.55
NrlP54846 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.59□□□□□ -0.55
NrlP54846 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.59□□□□□ -0.55
NrlP54846 Gm44605-201ENSMUST00000206892 949 ntBASIC11.59□□□□□ -0.55
NrlP54846 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.59□□□□□ -0.55
NrlP54846 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC11.59□□□□□ -0.55
NrlP54846 CT030135.2-201ENSMUST00000225255 893 ntBASIC11.59□□□□□ -0.55
NrlP54846 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.59□□□□□ -0.55
NrlP54846 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.59□□□□□ -0.55
NrlP54846 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
NrlP54846 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
NrlP54846 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.59□□□□□ -0.55
NrlP54846 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
NrlP54846 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NrlP54846 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.59□□□□□ -0.55
NrlP54846 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
NrlP54846 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
NrlP54846 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
NrlP54846 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
NrlP54846 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.58□□□□□ -0.56
NrlP54846 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
NrlP54846 Gm12947-201ENSMUST00000116114 420 ntBASIC11.58□□□□□ -0.56
NrlP54846 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.58□□□□□ -0.56
NrlP54846 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.58□□□□□ -0.56
NrlP54846 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Mir6387-201ENSMUST00000184042 108 ntBASIC11.58□□□□□ -0.56
NrlP54846 Gm43564-201ENSMUST00000196185 211 ntBASIC11.58□□□□□ -0.56
NrlP54846 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.58□□□□□ -0.56
NrlP54846 Gm7238-201ENSMUST00000206467 973 ntBASIC11.58□□□□□ -0.56
NrlP54846 Gm45258-201ENSMUST00000210042 853 ntBASIC11.58□□□□□ -0.56
NrlP54846 Gm45527-201ENSMUST00000211052 774 ntBASIC11.58□□□□□ -0.56
NrlP54846 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.58□□□□□ -0.56
NrlP54846 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC11.58□□□□□ -0.56
NrlP54846 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
NrlP54846 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC11.58□□□□□ -0.56
NrlP54846 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
NrlP54846 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.58□□□□□ -0.56
NrlP54846 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
NrlP54846 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.58□□□□□ -0.56
NrlP54846 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms