Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm16410-201ENSMUST00000094550 774 ntBASIC11.17□□□□□ -0.62
Sox1P53783 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox1P53783 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox1P53783 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Sox1P53783 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Sox1P53783 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox1P53783 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sox1P53783 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox1P53783 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox1P53783 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox1P53783 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sox1P53783 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.16□□□□□ -0.62
Sox1P53783 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sox1P53783 Gm22900-201ENSMUST00000104538 130 ntBASIC11.16□□□□□ -0.62
Sox1P53783 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Gm12463-201ENSMUST00000118271 849 ntBASIC11.16□□□□□ -0.62
Sox1P53783 Gm11295-201ENSMUST00000121379 803 ntBASIC11.16□□□□□ -0.62
Sox1P53783 Gm5766-202ENSMUST00000161633 799 ntBASIC11.16□□□□□ -0.62
Sox1P53783 Gm16301-201ENSMUST00000161959 295 ntBASIC11.16□□□□□ -0.62
Sox1P53783 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.16□□□□□ -0.62
Sox1P53783 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC11.16□□□□□ -0.62
Sox1P53783 Gm37486-201ENSMUST00000195663 405 ntBASIC11.16□□□□□ -0.62
Sox1P53783 Gm38314-201ENSMUST00000195709 625 ntBASIC11.16□□□□□ -0.62
Sox1P53783 Gm44124-201ENSMUST00000204159 472 ntBASIC11.16□□□□□ -0.62
Sox1P53783 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.16□□□□□ -0.62
Sox1P53783 Gm2716-201ENSMUST00000212350 643 ntBASIC11.16□□□□□ -0.62
Sox1P53783 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 AC158519.1-201ENSMUST00000228615 179 ntBASIC11.16□□□□□ -0.62
Sox1P53783 Olfr533-201ENSMUST00000071755 1052 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sox1P53783 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Sox1P53783 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sox1P53783 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.16□□□□□ -0.62
Sox1P53783 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.16□□□□□ -0.62
Sox1P53783 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Sox1P53783 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sox1P53783 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Sox1P53783 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Sox1P53783 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Sox1P53783 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox1P53783 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.15□□□□□ -0.62
Sox1P53783 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sox1P53783 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox1P53783 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sox1P53783 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox1P53783 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Sox1P53783 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox1P53783 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox1P53783 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox1P53783 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox1P53783 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox1P53783 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox1P53783 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox1P53783 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sox1P53783 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox1P53783 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC11.15□□□□□ -0.62
Sox1P53783 Gm12377-201ENSMUST00000118656 252 ntBASIC11.15□□□□□ -0.62
Sox1P53783 Gm14126-201ENSMUST00000122345 395 ntBASIC11.15□□□□□ -0.62
Sox1P53783 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC11.15□□□□□ -0.62
Sox1P53783 Gm13377-201ENSMUST00000137984 683 ntBASIC11.15□□□□□ -0.62
Sox1P53783 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC11.15□□□□□ -0.62
Sox1P53783 Gm3355-201ENSMUST00000160079 487 ntBASIC11.15□□□□□ -0.62
Sox1P53783 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC11.15□□□□□ -0.62
Sox1P53783 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.15□□□□□ -0.62
Sox1P53783 Gm18783-201ENSMUST00000220465 1151 ntBASIC11.15□□□□□ -0.62
Sox1P53783 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox1P53783 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox1P53783 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sox1P53783 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sox1P53783 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms