Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hoxc9P09633 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Hoxc9P09633 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm45663-201ENSMUST00000210429 1632 ntBASIC14.01□□□□□ -0.17
Hoxc9P09633 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm14997-201ENSMUST00000119232 636 ntBASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm6517-201ENSMUST00000121056 511 ntBASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm22662-201ENSMUST00000175290 256 ntBASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm17944-201ENSMUST00000186351 643 ntBASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm2716-201ENSMUST00000212350 643 ntBASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm7904-201ENSMUST00000217049 465 ntBASIC14.01□□□□□ -0.17
Hoxc9P09633 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC14.01□□□□□ -0.17
Hoxc9P09633 AC118639.1-202ENSMUST00000226957 653 ntBASIC14.01□□□□□ -0.17
Hoxc9P09633 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hoxc9P09633 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm4778-201ENSMUST00000098878 1098 ntBASIC14.01□□□□□ -0.17
Hoxc9P09633 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC14.01□□□□□ -0.17
Hoxc9P09633 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hoxc9P09633 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Gm3372-201ENSMUST00000198806 1792 ntBASIC14.01□□□□□ -0.17
Hoxc9P09633 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hoxc9P09633 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc9P09633 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc9P09633 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC14□□□□□ -0.17
Hoxc9P09633 Gm26943-201ENSMUST00000182295 957 ntBASIC14□□□□□ -0.17
Hoxc9P09633 Gm37597-201ENSMUST00000191853 382 ntBASIC14□□□□□ -0.17
Hoxc9P09633 Gm4430-202ENSMUST00000193902 1041 ntBASIC14□□□□□ -0.17
Hoxc9P09633 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC14□□□□□ -0.17
Hoxc9P09633 Gm44155-201ENSMUST00000203923 412 ntBASIC14□□□□□ -0.17
Hoxc9P09633 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 AC121357.1-201ENSMUST00000227365 608 ntBASIC14□□□□□ -0.17
Hoxc9P09633 Gm8615-201ENSMUST00000025307 771 ntBASIC14□□□□□ -0.17
Hoxc9P09633 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC14□□□□□ -0.17
Hoxc9P09633 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC14□□□□□ -0.17
Hoxc9P09633 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC14□□□□□ -0.17
Hoxc9P09633 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Hoxc9P09633 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Hoxc9P09633 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Hoxc9P09633 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC13.99□□□□□ -0.17
Hoxc9P09633 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Gm27826-201ENSMUST00000175282 255 ntBASIC13.99□□□□□ -0.17
Hoxc9P09633 Gm25591-201ENSMUST00000177317 94 ntBASIC13.99□□□□□ -0.17
Hoxc9P09633 Gm17799-201ENSMUST00000183270 667 ntBASIC13.99□□□□□ -0.17
Hoxc9P09633 Gm43106-201ENSMUST00000199485 637 ntBASIC13.99□□□□□ -0.17
Hoxc9P09633 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Hoxc9P09633 Gm8730-201ENSMUST00000076373 954 ntBASIC13.99□□□□□ -0.17
Hoxc9P09633 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Hoxc9P09633 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms