Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC8.83□□□□□ -1
Hoxd3P09027 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Gm43981-201ENSMUST00000203285 1467 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC8.82□□□□□ -1
Hoxd3P09027 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC8.82□□□□□ -1
Hoxd3P09027 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm4294-201ENSMUST00000105169 614 ntBASIC8.82□□□□□ -1
Hoxd3P09027 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Gm15933-201ENSMUST00000117215 616 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC8.82□□□□□ -1
Hoxd3P09027 Mup-ps10-201ENSMUST00000119626 556 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Gm11446-201ENSMUST00000121319 866 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm37284-201ENSMUST00000193607 539 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Gm37905-201ENSMUST00000195310 341 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm34023-201ENSMUST00000195539 217 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Gm44008-201ENSMUST00000204345 412 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC8.82□□□□□ -1
Hoxd3P09027 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Gm18597-201ENSMUST00000209519 694 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm2788-205ENSMUST00000209849 933 ntTSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC8.82□□□□□ -1
Hoxd3P09027 AC142113.2-201ENSMUST00000217425 748 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm5468-202ENSMUST00000227851 682 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC8.82□□□□□ -1
Hoxd3P09027 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC8.82□□□□□ -1
Hoxd3P09027 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC8.82□□□□□ -1
Hoxd3P09027 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 CT010447.1-201ENSMUST00000225657 1608 ntBASIC8.82□□□□□ -1
Hoxd3P09027 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC8.82□□□□□ -1
Hoxd3P09027 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Hoxd3P09027 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Hoxd3P09027 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hoxd3P09027 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC8.82□□□□□ -1
Hoxd3P09027 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC8.81□□□□□ -1
Hoxd3P09027 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms