Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.18□□□□□ -0.78
Krt1P04104 Gm8342-201ENSMUST00000209839 757 ntBASIC10.18□□□□□ -0.78
Krt1P04104 Gm5996-201ENSMUST00000211110 718 ntBASIC10.18□□□□□ -0.78
Krt1P04104 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.18□□□□□ -0.78
Krt1P04104 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.18□□□□□ -0.78
Krt1P04104 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Krt1P04104 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Krt1P04104 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Krt1P04104 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.18□□□□□ -0.78
Krt1P04104 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Krt1P04104 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC10.18□□□□□ -0.78
Krt1P04104 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Napepld-202ENSMUST00000115217 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC10.17□□□□□ -0.78
Krt1P04104 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
Krt1P04104 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Krt1P04104 Smg7-202ENSMUST00000073441 5767 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.17□□□□□ -0.78
Krt1P04104 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Krt1P04104 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.17□□□□□ -0.78
Krt1P04104 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.17□□□□□ -0.78
Krt1P04104 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Gm22018-201ENSMUST00000104357 131 ntBASIC10.17□□□□□ -0.78
Krt1P04104 Gm25148-201ENSMUST00000104611 123 ntBASIC10.17□□□□□ -0.78
Krt1P04104 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.17□□□□□ -0.78
Krt1P04104 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Gm5865-201ENSMUST00000198713 637 ntBASIC10.17□□□□□ -0.78
Krt1P04104 Gm19091-201ENSMUST00000208120 978 ntBASIC10.17□□□□□ -0.78
Krt1P04104 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Krt1P04104 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.17□□□□□ -0.78
Krt1P04104 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.17□□□□□ -0.78
Krt1P04104 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.17□□□□□ -0.78
Krt1P04104 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.17□□□□□ -0.78
Krt1P04104 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Gm26448-201ENSMUST00000082446 203 ntBASIC10.17□□□□□ -0.78
Krt1P04104 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Krt1P04104 Olfm3-202ENSMUST00000081752 4647 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Dhx30-219ENSMUST00000199529 4373 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Krt1P04104 Gm5403-201ENSMUST00000117105 2795 ntBASIC10.17□□□□□ -0.78
Krt1P04104 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.17□□□□□ -0.78
Krt1P04104 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC10.17□□□□□ -0.78
Krt1P04104 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Krt1P04104 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt1P04104 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.17□□□□□ -0.78
Krt1P04104 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC10.16□□□□□ -0.78
Krt1P04104 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Krt1P04104 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Grin2a-201ENSMUST00000032331 4395 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Krt1P04104 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Krt1P04104 Crispld2-203ENSMUST00000132583 4182 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Krt1P04104 Gm23270-201ENSMUST00000104055 131 ntBASIC10.16□□□□□ -0.78
Krt1P04104 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt1P04104 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.16□□□□□ -0.78
Krt1P04104 Gm11222-201ENSMUST00000119005 738 ntBASIC10.16□□□□□ -0.78
Krt1P04104 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.16□□□□□ -0.78
Krt1P04104 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms