Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tcof1O08784 Gm37597-201ENSMUST00000191853 382 ntBASIC12.72□□□□□ -0.37
Tcof1O08784 Gm42430-201ENSMUST00000197209 616 ntBASIC12.72□□□□□ -0.37
Tcof1O08784 Gm4903-201ENSMUST00000210462 405 ntBASIC12.72□□□□□ -0.37
Tcof1O08784 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.72□□□□□ -0.37
Tcof1O08784 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Tcof1O08784 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tcof1O08784 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tcof1O08784 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tcof1O08784 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.71□□□□□ -0.37
Tcof1O08784 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.71□□□□□ -0.37
Tcof1O08784 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Mir671-201ENSMUST00000102432 98 ntBASIC12.71□□□□□ -0.37
Tcof1O08784 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.71□□□□□ -0.37
Tcof1O08784 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Gm14234-201ENSMUST00000119539 845 ntBASIC12.71□□□□□ -0.37
Tcof1O08784 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.71□□□□□ -0.37
Tcof1O08784 Gm14993-201ENSMUST00000121180 164 ntBASIC12.71□□□□□ -0.37
Tcof1O08784 Mir1896-201ENSMUST00000122641 81 ntBASIC12.71□□□□□ -0.37
Tcof1O08784 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Gm5244-201ENSMUST00000164001 339 ntBASIC12.71□□□□□ -0.37
Tcof1O08784 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Gm44605-201ENSMUST00000206892 949 ntBASIC12.71□□□□□ -0.37
Tcof1O08784 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.71□□□□□ -0.37
Tcof1O08784 Gm8162-201ENSMUST00000213951 665 ntBASIC12.71□□□□□ -0.37
Tcof1O08784 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.71□□□□□ -0.37
Tcof1O08784 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.71□□□□□ -0.37
Tcof1O08784 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Tcof1O08784 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Tcof1O08784 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tcof1O08784 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tcof1O08784 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tcof1O08784 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Tcof1O08784 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tcof1O08784 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tcof1O08784 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tcof1O08784 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.71□□□□□ -0.38
Tcof1O08784 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tcof1O08784 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tcof1O08784 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tcof1O08784 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Tcof1O08784 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tcof1O08784 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tcof1O08784 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tcof1O08784 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Tcof1O08784 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.7□□□□□ -0.38
Tcof1O08784 Gm12943-201ENSMUST00000119616 210 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 Gm12453-201ENSMUST00000121981 331 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tcof1O08784 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tcof1O08784 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tcof1O08784 Gm23647-201ENSMUST00000175042 109 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 Rn5s-201ENSMUST00000177555 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 Gm22109-201ENSMUST00000177995 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 Gm22291-201ENSMUST00000178027 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 Gm23284-201ENSMUST00000178069 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s111-201ENSMUST00000178203 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s105-201ENSMUST00000178499 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s149-201ENSMUST00000178520 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s103-201ENSMUST00000178755 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s123-201ENSMUST00000178804 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s142-201ENSMUST00000178820 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s144-201ENSMUST00000178859 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s139-201ENSMUST00000178975 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s134-201ENSMUST00000178983 119 ntBASIC12.7□□□□□ -0.38
Tcof1O08784 n-R5s136-201ENSMUST00000179080 119 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms