Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 AC147366.2-201ENSMUST00000226859 2038 ntBASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Col4a6B1AVK5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Gm13303-201ENSMUST00000117125 1284 ntBASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Gm13215-201ENSMUST00000117559 472 ntBASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Gm12047-201ENSMUST00000117561 944 ntBASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Gm7251-201ENSMUST00000182661 1009 ntBASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Gm18894-201ENSMUST00000198794 694 ntBASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Gm7924-201ENSMUST00000203975 785 ntBASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 AC156274.1-201ENSMUST00000219193 634 ntBASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Col4a6B1AVK5 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Gm42731-201ENSMUST00000201839 1641 ntBASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Gm4925-202ENSMUST00000168843 1561 ntBASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.96□□□□□ -0.66
Col4a6B1AVK5 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Igkv3-9-201ENSMUST00000103398 359 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm2021-201ENSMUST00000190623 464 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm38321-201ENSMUST00000195053 235 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 AC116797.2-203ENSMUST00000225290 565 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm44664-201ENSMUST00000206841 1786 ntBASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Col4a6B1AVK5 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms