Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm14497-201ENSMUST00000119537 580 ntBASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm16030-201ENSMUST00000159098 603 ntBASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm38210-201ENSMUST00000191944 809 ntBASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm7082-201ENSMUST00000209880 969 ntBASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm18968-201ENSMUST00000221319 862 ntBASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 AC134793.1-202ENSMUST00000227444 803 ntBASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm16380-201ENSMUST00000077997 478 ntBASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chmp2aQ9DB34 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Gm12791-201ENSMUST00000120788 655 ntBASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Gm11952-201ENSMUST00000121172 821 ntBASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 AC115304.2-201ENSMUST00000226399 332 ntBASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chmp2aQ9DB34 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms