Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm26013-201ENSMUST00000104404 119 ntBASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm11451-201ENSMUST00000118946 630 ntBASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm15131-201ENSMUST00000119124 595 ntBASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm4812-201ENSMUST00000182847 993 ntBASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm7047-201ENSMUST00000196224 1063 ntBASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm42816-201ENSMUST00000198433 325 ntBASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm43380-201ENSMUST00000200421 220 ntBASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm8162-201ENSMUST00000213951 665 ntBASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Gm13437-201ENSMUST00000122434 1981 ntBASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp4bQ9D8B3 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm38312-201ENSMUST00000195426 1746 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm12616-201ENSMUST00000118594 382 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm12624-201ENSMUST00000177615 382 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm12621-201ENSMUST00000177760 382 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm12615-201ENSMUST00000177970 382 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm12622-201ENSMUST00000177975 382 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm12627-201ENSMUST00000178412 382 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm12625-201ENSMUST00000179122 382 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm12614-201ENSMUST00000179586 382 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm12613-201ENSMUST00000180323 382 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm9102-201ENSMUST00000219250 465 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp4bQ9D8B3 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp4bQ9D8B3 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp4bQ9D8B3 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp4bQ9D8B3 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC13.71□□□□□ -0.22
Chmp4bQ9D8B3 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp4bQ9D8B3 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp4bQ9D8B3 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp4bQ9D8B3 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Chmp4bQ9D8B3 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC13.71□□□□□ -0.22
Chmp4bQ9D8B3 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Chmp4bQ9D8B3 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp4bQ9D8B3 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms