Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm5697-201ENSMUST00000122295 2482 ntBASIC13.45□□□□□ -0.26
RtcbQ99LF4 AC124561.1-202ENSMUST00000228652 1929 ntBASIC13.45□□□□□ -0.26
RtcbQ99LF4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RtcbQ99LF4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RtcbQ99LF4 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.44□□□□□ -0.26
RtcbQ99LF4 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.44□□□□□ -0.26
RtcbQ99LF4 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Klf10-203ENSMUST00000227920 2144 ntBASIC13.44□□□□□ -0.26
RtcbQ99LF4 AC163646.3-202ENSMUST00000228685 691 ntBASIC13.44□□□□□ -0.26
RtcbQ99LF4 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RtcbQ99LF4 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RtcbQ99LF4 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm38111-201ENSMUST00000194817 2741 ntBASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.43□□□□□ -0.26
RtcbQ99LF4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm15373-201ENSMUST00000121495 214 ntBASIC13.43□□□□□ -0.26
RtcbQ99LF4 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC13.43□□□□□ -0.26
RtcbQ99LF4 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm22876-201ENSMUST00000175450 298 ntBASIC13.43□□□□□ -0.26
RtcbQ99LF4 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm18443-201ENSMUST00000185358 556 ntBASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm18552-201ENSMUST00000187425 538 ntBASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm18182-201ENSMUST00000191380 1251 ntBASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm37102-201ENSMUST00000195740 1105 ntBASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
RtcbQ99LF4 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC13.43□□□□□ -0.26
RtcbQ99LF4 AC165092.1-201ENSMUST00000224018 486 ntBASIC13.43□□□□□ -0.26
RtcbQ99LF4 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.43□□□□□ -0.26
RtcbQ99LF4 Gm7701-201ENSMUST00000163185 1479 ntBASIC13.42□□□□□ -0.26
RtcbQ99LF4 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC13.42□□□□□ -0.26
RtcbQ99LF4 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RtcbQ99LF4 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC13.42□□□□□ -0.26
RtcbQ99LF4 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms