Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm5599-201ENSMUST00000209602 788 ntBASIC9.93□□□□□ -0.82
Lims1Q99JW4 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.93□□□□□ -0.82
Lims1Q99JW4 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Lims1Q99JW4 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm13408-201ENSMUST00000119822 798 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm13284-201ENSMUST00000121020 547 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm13935-201ENSMUST00000121859 798 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm23045-201ENSMUST00000175041 96 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm19353-201ENSMUST00000184561 445 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm45118-201ENSMUST00000208928 825 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm37567-201ENSMUST00000193241 2279 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Lims1Q99JW4 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.92□□□□□ -0.82
Lims1Q99JW4 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Lims1Q99JW4 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Gm5308-201ENSMUST00000196752 1354 ntBASIC9.91□□□□□ -0.82
Lims1Q99JW4 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.91□□□□□ -0.82
Lims1Q99JW4 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Lims1Q99JW4 Rhox2-ps-201ENSMUST00000117421 322 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms