Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Gm10238-201ENSMUST00000089689 408 ntBASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smarcd2Q99JR8 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11□□□□□ -0.65
Smarcd2Q99JR8 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11□□□□□ -0.65
Smarcd2Q99JR8 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Gm6238-201ENSMUST00000120999 465 ntBASIC11□□□□□ -0.65
Smarcd2Q99JR8 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC11□□□□□ -0.65
Smarcd2Q99JR8 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Gm24346-201ENSMUST00000158712 194 ntBASIC11□□□□□ -0.65
Smarcd2Q99JR8 Gm8756-201ENSMUST00000183250 929 ntBASIC11□□□□□ -0.65
Smarcd2Q99JR8 Gm37860-201ENSMUST00000195380 1034 ntBASIC11□□□□□ -0.65
Smarcd2Q99JR8 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 AC103672.1-201ENSMUST00000227502 365 ntBASIC11□□□□□ -0.65
Smarcd2Q99JR8 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Gm25125-201ENSMUST00000083340 136 ntBASIC11□□□□□ -0.65
Smarcd2Q99JR8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Gm43482-201ENSMUST00000202797 1861 ntBASIC11□□□□□ -0.65
Smarcd2Q99JR8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Smarcd2Q99JR8 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Gm9574-201ENSMUST00000173127 845 ntBASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Gm5976-201ENSMUST00000180794 996 ntBASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Gm6644-201ENSMUST00000186507 951 ntBASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Gm37858-201ENSMUST00000192759 1231 ntBASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Gm42859-201ENSMUST00000199572 193 ntBASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 Gm42689-201ENSMUST00000202403 404 ntBASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC10.99□□□□□ -0.65
Smarcd2Q99JR8 AC133517.1-201ENSMUST00000225825 594 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms