Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm5298-201ENSMUST00000201122 892 ntBASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdhga4Q91XY4 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdhga4Q91XY4 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdhga4Q91XY4 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdhga4Q91XY4 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Pcdhga4Q91XY4 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
Pcdhga4Q91XY4 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.68
Pcdhga4Q91XY4 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Pcdhga4Q91XY4 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdhga4Q91XY4 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Pcdhga4Q91XY4 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.77□□□□□ -0.68
Pcdhga4Q91XY4 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Pcdhga4Q91XY4 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm25148-201ENSMUST00000104611 123 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm14270-201ENSMUST00000118388 846 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm15197-201ENSMUST00000120526 478 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm13117-201ENSMUST00000120894 691 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm28388-201ENSMUST00000186262 437 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm8197-202ENSMUST00000193422 934 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm9353-201ENSMUST00000200472 604 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.77□□□□□ -0.69
Pcdhga4Q91XY4 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms