Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.26□□□□□ -0.77
Clrn1Q8K445 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Mir453-201ENSMUST00000104732 82 ntBASIC10.26□□□□□ -0.77
Clrn1Q8K445 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm11952-201ENSMUST00000121172 821 ntBASIC10.26□□□□□ -0.77
Clrn1Q8K445 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Mir1956-201ENSMUST00000157748 65 ntBASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.26□□□□□ -0.77
Clrn1Q8K445 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.26□□□□□ -0.77
Clrn1Q8K445 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 CT009738.1-201ENSMUST00000219031 809 ntBASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.26□□□□□ -0.77
Clrn1Q8K445 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Clrn1Q8K445 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm12899-201ENSMUST00000120565 551 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm13937-201ENSMUST00000121000 988 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm10169-201ENSMUST00000121822 348 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm15744-201ENSMUST00000161734 213 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.25□□□□□ -0.77
Clrn1Q8K445 Mir6407-201ENSMUST00000184510 101 ntBASIC10.25□□□□□ -0.77
Clrn1Q8K445 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms