Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Mir1893-201ENSMUST00000122565 83 ntBASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Gm6485-201ENSMUST00000160676 439 ntBASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cchcr1Q8K2I2 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Gm6124-201ENSMUST00000188240 2580 ntBASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Gm26461-201ENSMUST00000175064 290 ntBASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Id2-203ENSMUST00000222667 958 ntBASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 AC159196.1-201ENSMUST00000225524 377 ntBASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Gm12799-201ENSMUST00000118151 2560 ntBASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cchcr1Q8K2I2 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cchcr1Q8K2I2 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cchcr1Q8K2I2 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Gm11735-201ENSMUST00000106377 1581 ntBASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Gm16071-201ENSMUST00000119589 793 ntBASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cchcr1Q8K2I2 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms