Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc38Q8CDN8 Gm19327-201ENSMUST00000220651 3271 ntBASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 2310065F04Rik-201ENSMUST00000125538 2724 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Gm16071-201ENSMUST00000119589 793 ntBASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Gm7985-201ENSMUST00000183329 981 ntBASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Gm17826-201ENSMUST00000189720 798 ntBASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Gm5865-201ENSMUST00000198713 637 ntBASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Gm44980-201ENSMUST00000205826 314 ntBASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Gm18042-201ENSMUST00000219887 790 ntBASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc38Q8CDN8 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gm9645-201ENSMUST00000197131 792 ntBASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc38Q8CDN8 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms