Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm23251-201ENSMUST00000103773 110 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm23200-201ENSMUST00000104379 132 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm14395-201ENSMUST00000120494 563 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm13328-201ENSMUST00000120816 1020 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm7666-201ENSMUST00000146631 819 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm37759-201ENSMUST00000194155 3246 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm7357-201ENSMUST00000195361 2991 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm43916-201ENSMUST00000205062 967 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm10020-201ENSMUST00000081993 612 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Gm42826-201ENSMUST00000197548 2639 ntBASIC9.18□□□□□ -0.94
Nhlrc3Q8CCH2 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm37582-201ENSMUST00000192953 1409 ntBASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Efcab12-201ENSMUST00000032468 2551 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm11836-201ENSMUST00000121022 441 ntBASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Nhlrc3Q8CCH2 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms