Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Mir8091-201ENSMUST00000183602 139 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Mir6407-201ENSMUST00000184510 101 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Gm7880-201ENSMUST00000203748 871 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Gm45594-201ENSMUST00000211717 241 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Gm7525-201ENSMUST00000219425 454 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.2□□□□□ -0.62
Trub1Q8C0D0 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Mir453-201ENSMUST00000104732 82 ntBASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm16518-201ENSMUST00000117960 508 ntBASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm12337-201ENSMUST00000119634 400 ntBASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm10169-201ENSMUST00000121822 348 ntBASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Mir1956-201ENSMUST00000157748 65 ntBASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm15744-201ENSMUST00000161734 213 ntBASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Mir3102-201ENSMUST00000175555 104 ntBASIC11.19□□□□□ -0.62
Trub1Q8C0D0 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm44155-201ENSMUST00000203923 412 ntBASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm5051-201ENSMUST00000204085 485 ntBASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm31941-201ENSMUST00000209689 350 ntBASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Trub1Q8C0D0 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm13888-201ENSMUST00000119148 422 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm11667-201ENSMUST00000119828 486 ntBASIC11.18□□□□□ -0.62
Trub1Q8C0D0 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms