Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm12948-201ENSMUST00000119406 682 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm16459-201ENSMUST00000121443 686 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm7255-201ENSMUST00000187371 908 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm6606-201ENSMUST00000193613 947 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm37782-201ENSMUST00000194879 678 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm45135-201ENSMUST00000206787 1184 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm19640-201ENSMUST00000214849 464 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sh3rf2Q8BZT2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Gm25288-201ENSMUST00000122800 265 ntBASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Gm5244-201ENSMUST00000164001 339 ntBASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Gm18001-201ENSMUST00000212023 688 ntBASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Gm8170-201ENSMUST00000218581 945 ntBASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sh3rf2Q8BZT2 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sh3rf2Q8BZT2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.02□□□□□ -0.64
Sh3rf2Q8BZT2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sh3rf2Q8BZT2 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sh3rf2Q8BZT2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sh3rf2Q8BZT2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sh3rf2Q8BZT2 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.02□□□□□ -0.64
Sh3rf2Q8BZT2 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sh3rf2Q8BZT2 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Sh3rf2Q8BZT2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sh3rf2Q8BZT2 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms