Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Gm37458-201ENSMUST00000194055 410 ntBASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Gm37981-201ENSMUST00000194280 535 ntBASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Gm6722-201ENSMUST00000221586 390 ntBASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Gm19009-201ENSMUST00000223072 823 ntBASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sh3rf1Q69ZI1 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Rims2-204ENSMUST00000226410 3685 ntBASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Gm11340-201ENSMUST00000119226 412 ntBASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Gm12628-201ENSMUST00000122193 382 ntBASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Gm24398-201ENSMUST00000157870 109 ntBASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Gm37597-201ENSMUST00000191853 382 ntBASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Gm25517-201ENSMUST00000083865 134 ntBASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Pigq-218ENSMUST00000208043 2987 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.07□□□□□ -0.64
Sh3rf1Q69ZI1 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Lrrc49-204ENSMUST00000114034 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Sh3rf1Q69ZI1 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms