Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Bdp1Q571C7 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.05□□□□□ -0.64
Bdp1Q571C7 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Bdp1Q571C7 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Bdp1Q571C7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Bdp1Q571C7 Gm42589-201ENSMUST00000199097 1751 ntBASIC11.05□□□□□ -0.64
Bdp1Q571C7 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Bdp1Q571C7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Bdp1Q571C7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Bdp1Q571C7 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.05□□□□□ -0.64
Bdp1Q571C7 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Snora68-201ENSMUST00000104375 131 ntBASIC11.04□□□□□ -0.64
Bdp1Q571C7 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC11.04□□□□□ -0.64
Bdp1Q571C7 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.04□□□□□ -0.64
Bdp1Q571C7 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Gm2716-201ENSMUST00000212350 643 ntBASIC11.04□□□□□ -0.64
Bdp1Q571C7 Gm26205-201ENSMUST00000082907 134 ntBASIC11.04□□□□□ -0.64
Bdp1Q571C7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Gm23521-201ENSMUST00000177845 110 ntBASIC11.04□□□□□ -0.64
Bdp1Q571C7 Mir7011-201ENSMUST00000183768 73 ntBASIC11.04□□□□□ -0.64
Bdp1Q571C7 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Gm26132-201ENSMUST00000083166 148 ntBASIC11.04□□□□□ -0.64
Bdp1Q571C7 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Gm6721-201ENSMUST00000218353 1445 ntBASIC11.04□□□□□ -0.64
Bdp1Q571C7 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.04□□□□□ -0.64
Bdp1Q571C7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.04□□□□□ -0.64
Bdp1Q571C7 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Bdp1Q571C7 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC11.03□□□□□ -0.64
Bdp1Q571C7 Gm9516-201ENSMUST00000119684 424 ntBASIC11.03□□□□□ -0.64
Bdp1Q571C7 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Gm11686-201ENSMUST00000122397 333 ntBASIC11.03□□□□□ -0.64
Bdp1Q571C7 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Gm25426-201ENSMUST00000157606 170 ntBASIC11.03□□□□□ -0.64
Bdp1Q571C7 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Gm30652-201ENSMUST00000199103 430 ntBASIC11.03□□□□□ -0.64
Bdp1Q571C7 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Mir683-2-201ENSMUST00000102099 109 ntBASIC11.03□□□□□ -0.64
Bdp1Q571C7 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Vegfa-204ENSMUST00000113520 654 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Gm11652-201ENSMUST00000117842 1267 ntBASIC11.03□□□□□ -0.64
Bdp1Q571C7 H2afb2-201ENSMUST00000118616 348 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Mir683-1-201ENSMUST00000179371 109 ntBASIC11.03□□□□□ -0.64
Bdp1Q571C7 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Gm38004-201ENSMUST00000192972 357 ntBASIC11.03□□□□□ -0.64
Bdp1Q571C7 Gm37559-201ENSMUST00000193556 832 ntBASIC11.03□□□□□ -0.64
Bdp1Q571C7 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Ermard-209ENSMUST00000226561 1019 ntBASIC11.03□□□□□ -0.64
Bdp1Q571C7 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Bdp1Q571C7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms