Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 AC129336.2-201ENSMUST00000218053 3086 ntBASIC9.4□□□□□ -0.91
Znf48Q3US17 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Znf48Q3US17 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Znf48Q3US17 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.4□□□□□ -0.91
Znf48Q3US17 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.4□□□□□ -0.91
Znf48Q3US17 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.39□□□□□ -0.91
Znf48Q3US17 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm11801-201ENSMUST00000117807 746 ntBASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm13600-201ENSMUST00000117949 744 ntBASIC9.39□□□□□ -0.91
Znf48Q3US17 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm22877-201ENSMUST00000175451 105 ntBASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm9022-201ENSMUST00000182482 992 ntBASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm27845-201ENSMUST00000184479 114 ntBASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm37154-201ENSMUST00000192266 1290 ntBASIC9.39□□□□□ -0.91
Znf48Q3US17 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm44712-201ENSMUST00000206250 1076 ntBASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm18996-201ENSMUST00000214851 755 ntBASIC9.39□□□□□ -0.91
Znf48Q3US17 AC124569.4-201ENSMUST00000223830 1220 ntBASIC9.39□□□□□ -0.91
Znf48Q3US17 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Vmn1r210-201ENSMUST00000072044 921 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Vmn1r216-201ENSMUST00000080253 1059 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Vmn1r223-201ENSMUST00000091719 1086 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm9072-201ENSMUST00000218390 1514 ntBASIC9.39□□□□□ -0.91
Znf48Q3US17 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.39□□□□□ -0.91
Znf48Q3US17 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Znf48Q3US17 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Znf48Q3US17 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Znf48Q3US17 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 Mir669p-2-201ENSMUST00000103868 87 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Mir669p-1-201ENSMUST00000103884 87 ntBASIC9.38□□□□□ -0.91
Znf48Q3US17 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Znf48Q3US17 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms