Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm27509-201ENSMUST00000102400 79 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 4930519G04Rik-203ENSMUST00000134389 731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm3571-201ENSMUST00000170703 1060 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm20844-201ENSMUST00000186101 654 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm21832-201ENSMUST00000186439 691 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm20921-201ENSMUST00000188265 652 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm21573-201ENSMUST00000190112 691 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm43049-201ENSMUST00000198099 462 ntTSL 3 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Smim7-201ENSMUST00000058733 642 ntTSL 2 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Olfr1513-201ENSMUST00000089739 942 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 AC211878.3-201ENSMUST00000222629 2018 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm38385-201ENSMUST00000194454 2351 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm14419-201ENSMUST00000108975 683 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm13999-201ENSMUST00000141511 969 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm13944-202ENSMUST00000146495 542 ntTSL 3 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm24039-201ENSMUST00000157878 132 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm32591-201ENSMUST00000203038 414 ntTSL 3 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 AC140409.1-201ENSMUST00000213907 457 ntTSL 3 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 AC154461.3-201ENSMUST00000224831 573 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 AC124581.2-201ENSMUST00000225459 282 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Lyg1-201ENSMUST00000027254 800 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Prpmp5-201ENSMUST00000048686 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm16559-201ENSMUST00000160080 1564 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm14705-201ENSMUST00000154109 1824 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Rbm26-204ENSMUST00000163545 3270 ntTSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Brd9-206ENSMUST00000222399 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm10398-201ENSMUST00000100826 397 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Apex2-202ENSMUST00000112719 969 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Zscan30-201ENSMUST00000115829 484 ntTSL 2 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 9430024E24Rik-201ENSMUST00000130532 713 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm25277-201ENSMUST00000157266 324 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm8877-201ENSMUST00000172657 655 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm18873-201ENSMUST00000219517 1045 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Mir195a-201ENSMUST00000083477 94 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Mir194-2-201ENSMUST00000083648 86 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm38116-201ENSMUST00000193873 1533 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Zfand1-201ENSMUST00000037839 1610 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Ccdc146-201ENSMUST00000030552 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 S100a16-203ENSMUST00000107331 723 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm11668-201ENSMUST00000119655 701 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Rspo4os-201ENSMUST00000152229 1281 ntTSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm26964-201ENSMUST00000182516 832 ntTSL 2 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm7893-201ENSMUST00000189666 225 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm37232-201ENSMUST00000194887 367 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm5314-201ENSMUST00000204852 466 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 AC122539.2-201ENSMUST00000220207 404 ntBASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm33940-201ENSMUST00000209205 1601 ntTSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Ush2AQ2QI47 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ush2AQ2QI47 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ush2AQ2QI47 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ush2AQ2QI47 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ush2AQ2QI47 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Ush2AQ2QI47 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ush2AQ2QI47 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms