Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ebf1Q07802 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ebf1Q07802 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.09□□□□□ -0.63
Ebf1Q07802 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ebf1Q07802 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.09□□□□□ -0.63
Ebf1Q07802 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.09□□□□□ -0.63
Ebf1Q07802 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.09□□□□□ -0.63
Ebf1Q07802 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.09□□□□□ -0.63
Ebf1Q07802 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Gm11952-201ENSMUST00000121172 821 ntBASIC11.09□□□□□ -0.63
Ebf1Q07802 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Gm16165-201ENSMUST00000160140 795 ntBASIC11.09□□□□□ -0.63
Ebf1Q07802 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Ebf1Q07802 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.09□□□□□ -0.63
Ebf1Q07802 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Ebf1Q07802 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.09□□□□□ -0.63
Ebf1Q07802 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.09□□□□□ -0.63
Ebf1Q07802 Gm43506-201ENSMUST00000200675 753 ntBASIC11.09□□□□□ -0.63
Ebf1Q07802 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC11.09□□□□□ -0.63
Ebf1Q07802 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.09□□□□□ -0.63
Ebf1Q07802 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.09□□□□□ -0.63
Ebf1Q07802 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ebf1Q07802 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Ebf1Q07802 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Ebf1Q07802 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ebf1Q07802 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.09□□□□□ -0.63
Ebf1Q07802 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.09□□□□□ -0.63
Ebf1Q07802 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ebf1Q07802 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.63
Ebf1Q07802 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.08□□□□□ -0.64
Ebf1Q07802 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.08□□□□□ -0.64
Ebf1Q07802 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.08□□□□□ -0.64
Ebf1Q07802 Gm23675-201ENSMUST00000157311 125 ntBASIC11.08□□□□□ -0.64
Ebf1Q07802 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.08□□□□□ -0.64
Ebf1Q07802 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC11.08□□□□□ -0.64
Ebf1Q07802 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ebf1Q07802 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.08□□□□□ -0.64
Ebf1Q07802 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.08□□□□□ -0.64
Ebf1Q07802 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.08□□□□□ -0.64
Ebf1Q07802 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.08□□□□□ -0.64
Ebf1Q07802 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ebf1Q07802 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms