Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm6450-201ENSMUST00000200896 574 ntBASIC11.98□□□□□ -0.49
Lig3P97386 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC11.98□□□□□ -0.49
Lig3P97386 Gm39288-201ENSMUST00000210554 446 ntBASIC11.98□□□□□ -0.49
Lig3P97386 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lig3P97386 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lig3P97386 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lig3P97386 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 AC160340.2-201ENSMUST00000220812 3675 ntBASIC11.98□□□□□ -0.49
Lig3P97386 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.98□□□□□ -0.49
Lig3P97386 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.98□□□□□ -0.49
Lig3P97386 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.98□□□□□ -0.49
Lig3P97386 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lig3P97386 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lig3P97386 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lig3P97386 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.97□□□□□ -0.49
Lig3P97386 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.97□□□□□ -0.49
Lig3P97386 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Lig3P97386 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.97□□□□□ -0.49
Lig3P97386 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.97□□□□□ -0.49
Lig3P97386 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.97□□□□□ -0.49
Lig3P97386 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.97□□□□□ -0.49
Lig3P97386 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.97□□□□□ -0.49
Lig3P97386 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lig3P97386 Gm42430-201ENSMUST00000197209 616 ntBASIC11.97□□□□□ -0.49
Lig3P97386 Gm43854-201ENSMUST00000200418 394 ntBASIC11.97□□□□□ -0.49
Lig3P97386 Gm45085-201ENSMUST00000209100 441 ntBASIC11.97□□□□□ -0.49
Lig3P97386 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lig3P97386 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.97□□□□□ -0.49
Lig3P97386 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lig3P97386 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.97□□□□□ -0.49
Lig3P97386 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.97□□□□□ -0.49
Lig3P97386 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lig3P97386 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lig3P97386 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lig3P97386 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lig3P97386 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lig3P97386 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lig3P97386 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lig3P97386 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lig3P97386 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Lig3P97386 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lig3P97386 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lig3P97386 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lig3P97386 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Lig3P97386 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Lig3P97386 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Lig3P97386 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lig3P97386 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Lig3P97386 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.96□□□□□ -0.49
Lig3P97386 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC11.96□□□□□ -0.49
Lig3P97386 Gm23675-201ENSMUST00000157311 125 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.96□□□□□ -0.49
Lig3P97386 Gm23400-201ENSMUST00000174994 102 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Gm26463-201ENSMUST00000175065 101 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Gm24332-201ENSMUST00000175102 102 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Gm25959-201ENSMUST00000175112 102 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Gm22475-201ENSMUST00000175169 102 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Gm22903-201ENSMUST00000175193 102 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Gm25070-201ENSMUST00000175237 102 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Gm24159-201ENSMUST00000175264 102 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Gm25299-201ENSMUST00000175283 102 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Gm24809-201ENSMUST00000175318 271 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Gm23798-201ENSMUST00000175560 102 ntBASIC11.96□□□□□ -0.49
Lig3P97386 Gm23802-201ENSMUST00000175565 102 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms