Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Traf6P70196 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.82□□□□□ -0.68
Traf6P70196 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Traf6P70196 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Traf6P70196 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Traf6P70196 Gm3372-201ENSMUST00000198806 1792 ntBASIC10.82□□□□□ -0.68
Traf6P70196 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Traf6P70196 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Traf6P70196 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Traf6P70196 AC163296.2-201ENSMUST00000220177 1315 ntBASIC10.82□□□□□ -0.68
Traf6P70196 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Traf6P70196 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Traf6P70196 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Traf6P70196 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Traf6P70196 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.81□□□□□ -0.68
Traf6P70196 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.81□□□□□ -0.68
Traf6P70196 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Traf6P70196 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Traf6P70196 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Traf6P70196 Gm13045-201ENSMUST00000119019 712 ntBASIC10.81□□□□□ -0.68
Traf6P70196 Gm15432-201ENSMUST00000121106 195 ntBASIC10.81□□□□□ -0.68
Traf6P70196 Gm7666-201ENSMUST00000146631 819 ntBASIC10.81□□□□□ -0.68
Traf6P70196 Mir7051-201ENSMUST00000184167 73 ntBASIC10.81□□□□□ -0.68
Traf6P70196 Mir8115-201ENSMUST00000184992 119 ntBASIC10.81□□□□□ -0.68
Traf6P70196 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.81□□□□□ -0.68
Traf6P70196 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Gm5302-201ENSMUST00000202130 796 ntBASIC10.81□□□□□ -0.68
Traf6P70196 Gm43947-201ENSMUST00000203019 959 ntBASIC10.81□□□□□ -0.68
Traf6P70196 Gm44100-201ENSMUST00000204329 436 ntBASIC10.81□□□□□ -0.68
Traf6P70196 Gm44760-201ENSMUST00000206375 1173 ntBASIC10.81□□□□□ -0.68
Traf6P70196 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.81□□□□□ -0.68
Traf6P70196 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Gm23105-201ENSMUST00000083719 134 ntBASIC10.81□□□□□ -0.68
Traf6P70196 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Traf6P70196 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Traf6P70196 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Traf6P70196 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Traf6P70196 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Traf6P70196 Rims2-204ENSMUST00000226410 3685 ntBASIC10.8□□□□□ -0.68
Traf6P70196 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.8□□□□□ -0.68
Traf6P70196 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Traf6P70196 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Traf6P70196 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Traf6P70196 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Traf6P70196 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Gm12165-201ENSMUST00000117047 342 ntBASIC10.8□□□□□ -0.68
Traf6P70196 Gm14659-201ENSMUST00000117667 843 ntBASIC10.8□□□□□ -0.68
Traf6P70196 Gm15352-201ENSMUST00000118696 270 ntBASIC10.8□□□□□ -0.68
Traf6P70196 Mir1896-201ENSMUST00000122641 81 ntBASIC10.8□□□□□ -0.68
Traf6P70196 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Gm23699-201ENSMUST00000158835 135 ntBASIC10.8□□□□□ -0.68
Traf6P70196 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.8□□□□□ -0.68
Traf6P70196 Gm42919-201ENSMUST00000197753 1284 ntBASIC10.8□□□□□ -0.68
Traf6P70196 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.8□□□□□ -0.68
Traf6P70196 Zmym2-202ENSMUST00000223669 1281 ntBASIC10.8□□□□□ -0.68
Traf6P70196 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.8□□□□□ -0.68
Traf6P70196 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Traf6P70196 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Traf6P70196 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.8□□□□□ -0.68
Traf6P70196 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms