Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.11□□□□□ -0.63
Tubgcp3P58854 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gm18561-201ENSMUST00000206027 804 ntBASIC11.11□□□□□ -0.63
Tubgcp3P58854 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.11□□□□□ -0.63
Tubgcp3P58854 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.11□□□□□ -0.63
Tubgcp3P58854 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Snora73b-201ENSMUST00000083419 205 ntBASIC11.11□□□□□ -0.63
Tubgcp3P58854 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Tubgcp3P58854 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Tubgcp3P58854 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm12663-201ENSMUST00000118481 958 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm38321-201ENSMUST00000195053 235 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm9463-201ENSMUST00000206707 601 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm8959-201ENSMUST00000213150 571 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm18042-201ENSMUST00000219887 790 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Id2-203ENSMUST00000222667 958 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 Nsd1-205ENSMUST00000224693 852 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm25580-201ENSMUST00000083409 327 ntBASIC11.1□□□□□ -0.63
Tubgcp3P58854 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Tubgcp3P58854 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms