Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sox1P53783 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Sox1P53783 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.19□□□□□ -0.62
Sox1P53783 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Sox1P53783 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Sox1P53783 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Sox1P53783 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.19□□□□□ -0.62
Sox1P53783 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Sox1P53783 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox1P53783 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Sox1P53783 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox1P53783 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox1P53783 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Sox1P53783 Gm15353-201ENSMUST00000110860 702 ntTSL 5 BASIC11.18□□□□□ -0.62
Sox1P53783 Gm12529-201ENSMUST00000119529 268 ntBASIC11.18□□□□□ -0.62
Sox1P53783 Gm6517-201ENSMUST00000121056 511 ntBASIC11.18□□□□□ -0.62
Sox1P53783 Gm11686-201ENSMUST00000122397 333 ntBASIC11.18□□□□□ -0.62
Sox1P53783 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.18□□□□□ -0.62
Sox1P53783 Gm17764-201ENSMUST00000185925 391 ntBASIC11.18□□□□□ -0.62
Sox1P53783 Gm28746-201ENSMUST00000187453 380 ntBASIC11.18□□□□□ -0.62
Sox1P53783 Gm7539-201ENSMUST00000189789 630 ntBASIC11.18□□□□□ -0.62
Sox1P53783 Gm29487-201ENSMUST00000190146 256 ntBASIC11.18□□□□□ -0.62
Sox1P53783 AC139155.1-201ENSMUST00000226043 444 ntBASIC11.18□□□□□ -0.62
Sox1P53783 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.18□□□□□ -0.62
Sox1P53783 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sox1P53783 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Sox1P53783 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Sox1P53783 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Sox1P53783 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Sox1P53783 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Sox1P53783 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Sox1P53783 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox1P53783 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Sox1P53783 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.17□□□□□ -0.62
Sox1P53783 Gm38227-201ENSMUST00000193036 1602 ntBASIC11.17□□□□□ -0.62
Sox1P53783 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox1P53783 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Gm14108-201ENSMUST00000122234 494 ntBASIC11.17□□□□□ -0.62
Sox1P53783 1700030A11Rik-201ENSMUST00000125317 888 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Gm14344-201ENSMUST00000139338 580 ntTSL 3 BASIC11.17□□□□□ -0.62
Sox1P53783 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox1P53783 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC11.17□□□□□ -0.62
Sox1P53783 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC11.17□□□□□ -0.62
Sox1P53783 Gm20616-201ENSMUST00000177262 716 ntTSL 3 BASIC11.17□□□□□ -0.62
Sox1P53783 Gm43965-201ENSMUST00000203779 789 ntBASIC11.17□□□□□ -0.62
Sox1P53783 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Gm8796-201ENSMUST00000219122 936 ntBASIC11.17□□□□□ -0.62
Sox1P53783 AC134860.2-201ENSMUST00000225277 1036 ntBASIC11.17□□□□□ -0.62
Sox1P53783 Tex29-201ENSMUST00000033909 822 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox1P53783 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Sox1P53783 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Sox1P53783 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms