Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Pdx1P52946 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Pdx1P52946 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Pdx1P52946 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.75□□□□□ -0.69
Pdx1P52946 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Pdx1P52946 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.75□□□□□ -0.69
Pdx1P52946 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Pdx1P52946 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Gm25562-201ENSMUST00000104608 133 ntBASIC10.75□□□□□ -0.69
Pdx1P52946 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.75□□□□□ -0.69
Pdx1P52946 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.75□□□□□ -0.69
Pdx1P52946 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Pdx1P52946 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Pdx1P52946 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.75□□□□□ -0.69
Pdx1P52946 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC10.75□□□□□ -0.69
Pdx1P52946 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Gm10752-201ENSMUST00000218348 729 ntBASIC10.75□□□□□ -0.69
Pdx1P52946 Gm8255-201ENSMUST00000218693 305 ntBASIC10.75□□□□□ -0.69
Pdx1P52946 Gm3619-201ENSMUST00000219947 775 ntBASIC10.75□□□□□ -0.69
Pdx1P52946 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.75□□□□□ -0.69
Pdx1P52946 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.75□□□□□ -0.69
Pdx1P52946 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Pdx1P52946 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Pdx1P52946 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Pdx1P52946 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Pdx1P52946 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Pdx1P52946 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.75□□□□□ -0.69
Pdx1P52946 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.75□□□□□ -0.69
Pdx1P52946 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Pdx1P52946 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC10.75□□□□□ -0.69
Pdx1P52946 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Pdx1P52946 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.74□□□□□ -0.69
Pdx1P52946 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.74□□□□□ -0.69
Pdx1P52946 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.74□□□□□ -0.69
Pdx1P52946 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.74□□□□□ -0.69
Pdx1P52946 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC10.74□□□□□ -0.69
Pdx1P52946 Gm5244-201ENSMUST00000164001 339 ntBASIC10.74□□□□□ -0.69
Pdx1P52946 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Gm17192-201ENSMUST00000169031 511 ntBASIC10.74□□□□□ -0.69
Pdx1P52946 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Gm25072-201ENSMUST00000175233 235 ntBASIC10.74□□□□□ -0.69
Pdx1P52946 Gm23153-201ENSMUST00000175323 313 ntBASIC10.74□□□□□ -0.69
Pdx1P52946 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Gm38321-201ENSMUST00000195053 235 ntBASIC10.74□□□□□ -0.69
Pdx1P52946 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Pdx1P52946 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
Pdx1P52946 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.74□□□□□ -0.69
Pdx1P52946 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms