Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rfx1P48377 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC12.95□□□□□ -0.34
Rfx1P48377 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.95□□□□□ -0.34
Rfx1P48377 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.95□□□□□ -0.34
Rfx1P48377 Gm9089-201ENSMUST00000122027 526 ntBASIC12.95□□□□□ -0.34
Rfx1P48377 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Rfx1P48377 Cul2-206ENSMUST00000162301 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.95□□□□□ -0.34
Rfx1P48377 Mir7051-201ENSMUST00000184167 73 ntBASIC12.95□□□□□ -0.34
Rfx1P48377 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.95□□□□□ -0.34
Rfx1P48377 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.95□□□□□ -0.34
Rfx1P48377 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rfx1P48377 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC12.95□□□□□ -0.34
Rfx1P48377 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rfx1P48377 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.95□□□□□ -0.34
Rfx1P48377 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rfx1P48377 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rfx1P48377 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.95□□□□□ -0.34
Rfx1P48377 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rfx1P48377 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC12.94□□□□□ -0.34
Rfx1P48377 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.94□□□□□ -0.34
Rfx1P48377 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC12.94□□□□□ -0.34
Rfx1P48377 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rfx1P48377 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.94□□□□□ -0.34
Rfx1P48377 Gm22920-201ENSMUST00000102175 109 ntBASIC12.94□□□□□ -0.34
Rfx1P48377 Gm14058-201ENSMUST00000116082 735 ntBASIC12.94□□□□□ -0.34
Rfx1P48377 Gm12419-201ENSMUST00000116649 636 ntBASIC12.94□□□□□ -0.34
Rfx1P48377 Gm13035-201ENSMUST00000117496 342 ntBASIC12.94□□□□□ -0.34
Rfx1P48377 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.94□□□□□ -0.34
Rfx1P48377 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.94□□□□□ -0.34
Rfx1P48377 Gm23757-201ENSMUST00000158353 100 ntBASIC12.94□□□□□ -0.34
Rfx1P48377 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.94□□□□□ -0.34
Rfx1P48377 Gm7985-201ENSMUST00000183329 981 ntBASIC12.94□□□□□ -0.34
Rfx1P48377 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.94□□□□□ -0.34
Rfx1P48377 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.94□□□□□ -0.34
Rfx1P48377 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC12.94□□□□□ -0.34
Rfx1P48377 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC12.94□□□□□ -0.34
Rfx1P48377 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.94□□□□□ -0.34
Rfx1P48377 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rfx1P48377 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.94□□□□□ -0.34
Rfx1P48377 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC12.94□□□□□ -0.34
Rfx1P48377 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rfx1P48377 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx1P48377 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx1P48377 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx1P48377 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.93□□□□□ -0.34
Rfx1P48377 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx1P48377 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx1P48377 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx1P48377 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx1P48377 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx1P48377 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx1P48377 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.93□□□□□ -0.34
Rfx1P48377 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rfx1P48377 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rfx1P48377 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rfx1P48377 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rfx1P48377 AC158779.1-201ENSMUST00000228912 3861 ntBASIC12.93□□□□□ -0.34
Rfx1P48377 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx1P48377 Tor1aip2-204ENSMUST00000111754 2491 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx1P48377 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Rfx1P48377 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.93□□□□□ -0.34
Rfx1P48377 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Rfx1P48377 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rfx1P48377 Gm15968-201ENSMUST00000119342 1168 ntBASIC12.93□□□□□ -0.34
Rfx1P48377 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.93□□□□□ -0.34
Rfx1P48377 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Rfx1P48377 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC12.93□□□□□ -0.34
Rfx1P48377 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.93□□□□□ -0.34
Rfx1P48377 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.93□□□□□ -0.34
Rfx1P48377 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
Rfx1P48377 Gm21156-201ENSMUST00000189693 869 ntBASIC12.93□□□□□ -0.34
Rfx1P48377 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.93□□□□□ -0.34
Rfx1P48377 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.93□□□□□ -0.34
Rfx1P48377 Gm43186-201ENSMUST00000198130 824 ntBASIC12.93□□□□□ -0.34
Rfx1P48377 Gm45331-201ENSMUST00000209868 554 ntBASIC12.93□□□□□ -0.34
Rfx1P48377 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.93□□□□□ -0.34
Rfx1P48377 Gm5369-201ENSMUST00000217499 588 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms