Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.36□□□□□ -0.75
Cdx2P43241 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdx2P43241 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC10.36□□□□□ -0.75
Cdx2P43241 Gm7805-201ENSMUST00000154348 448 ntBASIC10.36□□□□□ -0.75
Cdx2P43241 Gm26174-201ENSMUST00000158415 219 ntBASIC10.36□□□□□ -0.75
Cdx2P43241 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC10.36□□□□□ -0.75
Cdx2P43241 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdx2P43241 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.36□□□□□ -0.75
Cdx2P43241 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.36□□□□□ -0.75
Cdx2P43241 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Cdx2P43241 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.36□□□□□ -0.75
Cdx2P43241 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdx2P43241 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cdx2P43241 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdx2P43241 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdx2P43241 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdx2P43241 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Cdx2P43241 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdx2P43241 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdx2P43241 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdx2P43241 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdx2P43241 Gm15636-201ENSMUST00000119205 668 ntBASIC10.35□□□□□ -0.75
Cdx2P43241 Gm15031-201ENSMUST00000121341 210 ntBASIC10.35□□□□□ -0.75
Cdx2P43241 Gm11736-201ENSMUST00000121468 505 ntBASIC10.35□□□□□ -0.75
Cdx2P43241 Gm9574-201ENSMUST00000173127 845 ntBASIC10.35□□□□□ -0.75
Cdx2P43241 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Gm17944-201ENSMUST00000186351 643 ntBASIC10.35□□□□□ -0.75
Cdx2P43241 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC10.35□□□□□ -0.75
Cdx2P43241 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 AC154461.1-201ENSMUST00000224207 1005 ntBASIC10.35□□□□□ -0.75
Cdx2P43241 Gm5424-201ENSMUST00000053865 1240 ntBASIC10.35□□□□□ -0.75
Cdx2P43241 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdx2P43241 Atf7-201ENSMUST00000096143 390 ntBASIC10.35□□□□□ -0.75
Cdx2P43241 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cdx2P43241 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.35□□□□□ -0.75
Cdx2P43241 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cdx2P43241 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdx2P43241 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdx2P43241 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cdx2P43241 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdx2P43241 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx2P43241 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx2P43241 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx2P43241 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.34□□□□□ -0.75
Cdx2P43241 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC10.34□□□□□ -0.75
Cdx2P43241 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx2P43241 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx2P43241 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx2P43241 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx2P43241 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.34□□□□□ -0.75
Cdx2P43241 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx2P43241 Gm42971-201ENSMUST00000199228 2079 ntBASIC10.34□□□□□ -0.75
Cdx2P43241 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx2P43241 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx2P43241 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx2P43241 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdx2P43241 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cdx2P43241 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Cdx2P43241 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms