Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.48□□□□□ -0.41
Vcam1P29533 AC129217.1-201ENSMUST00000225181 642 ntBASIC12.48□□□□□ -0.41
Vcam1P29533 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.48□□□□□ -0.41
Vcam1P29533 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vcam1P29533 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vcam1P29533 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Vcam1P29533 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Vcam1P29533 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vcam1P29533 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vcam1P29533 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vcam1P29533 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Gm23255-201ENSMUST00000102244 110 ntBASIC12.47□□□□□ -0.41
Vcam1P29533 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC12.47□□□□□ -0.41
Vcam1P29533 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.47□□□□□ -0.41
Vcam1P29533 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC12.47□□□□□ -0.41
Vcam1P29533 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Gm5543-201ENSMUST00000193329 1091 ntBASIC12.47□□□□□ -0.41
Vcam1P29533 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC12.47□□□□□ -0.41
Vcam1P29533 Gm44155-201ENSMUST00000203923 412 ntBASIC12.47□□□□□ -0.41
Vcam1P29533 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC12.47□□□□□ -0.41
Vcam1P29533 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC12.47□□□□□ -0.41
Vcam1P29533 AC116797.2-202ENSMUST00000223587 1017 ntBASIC12.47□□□□□ -0.41
Vcam1P29533 CT030035.1-201ENSMUST00000223964 935 ntBASIC12.47□□□□□ -0.41
Vcam1P29533 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vcam1P29533 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC12.47□□□□□ -0.41
Vcam1P29533 Mir194-2-201ENSMUST00000083648 86 ntBASIC12.47□□□□□ -0.41
Vcam1P29533 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.47□□□□□ -0.41
Vcam1P29533 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.47□□□□□ -0.41
Vcam1P29533 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.47□□□□□ -0.41
Vcam1P29533 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vcam1P29533 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Vcam1P29533 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.46□□□□□ -0.41
Vcam1P29533 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Gm24140-201ENSMUST00000122773 326 ntBASIC12.46□□□□□ -0.41
Vcam1P29533 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Mir6359-201ENSMUST00000183668 81 ntBASIC12.46□□□□□ -0.41
Vcam1P29533 Gm27441-201ENSMUST00000185000 105 ntBASIC12.46□□□□□ -0.41
Vcam1P29533 Zcwpw2-203ENSMUST00000187803 372 ntBASIC12.46□□□□□ -0.41
Vcam1P29533 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC12.46□□□□□ -0.41
Vcam1P29533 Gm38038-201ENSMUST00000193803 259 ntBASIC12.46□□□□□ -0.41
Vcam1P29533 Gm8643-201ENSMUST00000195228 625 ntBASIC12.46□□□□□ -0.41
Vcam1P29533 Gm42617-201ENSMUST00000197640 1229 ntBASIC12.46□□□□□ -0.41
Vcam1P29533 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.46□□□□□ -0.41
Vcam1P29533 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Vcam1P29533 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Gm8796-201ENSMUST00000219122 936 ntBASIC12.46□□□□□ -0.41
Vcam1P29533 AC134913.2-201ENSMUST00000225017 771 ntBASIC12.46□□□□□ -0.41
Vcam1P29533 AC133517.1-201ENSMUST00000225825 594 ntBASIC12.46□□□□□ -0.41
Vcam1P29533 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Vcam1P29533 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Vcam1P29533 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vcam1P29533 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Vcam1P29533 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Vcam1P29533 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Vcam1P29533 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vcam1P29533 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vcam1P29533 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vcam1P29533 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms