Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.61□□□□□ -0.39
Pde6aP27664 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.61□□□□□ -0.39
Pde6aP27664 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pde6aP27664 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Gm37860-201ENSMUST00000195380 1034 ntBASIC12.61□□□□□ -0.39
Pde6aP27664 Gm42859-201ENSMUST00000199572 193 ntBASIC12.61□□□□□ -0.39
Pde6aP27664 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.61□□□□□ -0.39
Pde6aP27664 Gm45258-201ENSMUST00000210042 853 ntBASIC12.61□□□□□ -0.39
Pde6aP27664 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.61□□□□□ -0.39
Pde6aP27664 Gm18035-201ENSMUST00000211962 589 ntBASIC12.61□□□□□ -0.39
Pde6aP27664 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pde6aP27664 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.61□□□□□ -0.39
Pde6aP27664 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pde6aP27664 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.61□□□□□ -0.39
Pde6aP27664 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pde6aP27664 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.61□□□□□ -0.39
Pde6aP27664 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pde6aP27664 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pde6aP27664 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pde6aP27664 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pde6aP27664 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC12.6□□□□□ -0.39
Pde6aP27664 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.6□□□□□ -0.39
Pde6aP27664 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pde6aP27664 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.6□□□□□ -0.39
Pde6aP27664 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pde6aP27664 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pde6aP27664 Gm11560-201ENSMUST00000117567 948 ntBASIC12.6□□□□□ -0.39
Pde6aP27664 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.6□□□□□ -0.39
Pde6aP27664 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC12.6□□□□□ -0.39
Pde6aP27664 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.6□□□□□ -0.39
Pde6aP27664 Gm7719-201ENSMUST00000182374 975 ntBASIC12.6□□□□□ -0.39
Pde6aP27664 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC12.6□□□□□ -0.39
Pde6aP27664 Gm44155-201ENSMUST00000203923 412 ntBASIC12.6□□□□□ -0.39
Pde6aP27664 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC12.6□□□□□ -0.39
Pde6aP27664 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.6□□□□□ -0.39
Pde6aP27664 Gm18059-201ENSMUST00000208073 580 ntBASIC12.6□□□□□ -0.39
Pde6aP27664 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.6□□□□□ -0.39
Pde6aP27664 AC124581.2-201ENSMUST00000225459 282 ntBASIC12.6□□□□□ -0.39
Pde6aP27664 Gm26670-202ENSMUST00000226862 340 ntBASIC12.6□□□□□ -0.39
Pde6aP27664 Gm7536-201ENSMUST00000077389 444 ntBASIC12.6□□□□□ -0.39
Pde6aP27664 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.6□□□□□ -0.39
Pde6aP27664 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pde6aP27664 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pde6aP27664 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Pde6aP27664 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pde6aP27664 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pde6aP27664 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.59□□□□□ -0.39
Pde6aP27664 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC12.59□□□□□ -0.39
Pde6aP27664 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pde6aP27664 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.59□□□□□ -0.39
Pde6aP27664 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pde6aP27664 Gm12337-201ENSMUST00000119634 400 ntBASIC12.59□□□□□ -0.39
Pde6aP27664 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Gm43912-201ENSMUST00000204352 538 ntBASIC12.59□□□□□ -0.39
Pde6aP27664 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC12.59□□□□□ -0.39
Pde6aP27664 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pde6aP27664 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pde6aP27664 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.59□□□□□ -0.39
Pde6aP27664 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pde6aP27664 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms