Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.07□□□□□ -0.96
Col8a2P25318 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Col8a2P25318 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col8a2P25318 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Col8a2P25318 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Gm6158-201ENSMUST00000109467 904 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Gm11919-201ENSMUST00000117609 721 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Gm5244-201ENSMUST00000164001 339 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Gm17070-201ENSMUST00000170463 784 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Gm18733-202ENSMUST00000174447 401 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 n-R5s130-201ENSMUST00000178128 119 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Gm24312-201ENSMUST00000178677 119 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 n-R5s106-201ENSMUST00000179060 119 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 n-R5s118-201ENSMUST00000179887 119 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Gm18014-201ENSMUST00000183369 817 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Platr10-202ENSMUST00000191479 818 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Gm5870-201ENSMUST00000196461 282 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Gm40414-201ENSMUST00000197608 481 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Gm6423-201ENSMUST00000204315 934 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Gm8170-201ENSMUST00000218581 945 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col8a2P25318 CT573086.4-201ENSMUST00000226729 342 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Gm25201-201ENSMUST00000083093 170 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Col8a2P25318 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Gm15519-201ENSMUST00000120088 1566 ntBASIC9.07□□□□□ -0.96
Col8a2P25318 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.07□□□□□ -0.96
Col8a2P25318 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Col8a2P25318 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.06□□□□□ -0.96
Col8a2P25318 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Col8a2P25318 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Col8a2P25318 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.06□□□□□ -0.96
Col8a2P25318 Gm42858-201ENSMUST00000202512 1704 ntBASIC9.06□□□□□ -0.96
Col8a2P25318 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
Col8a2P25318 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC9.06□□□□□ -0.96
Col8a2P25318 Gm12816-201ENSMUST00000118069 1212 ntBASIC9.06□□□□□ -0.96
Col8a2P25318 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.06□□□□□ -0.96
Col8a2P25318 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC9.06□□□□□ -0.96
Col8a2P25318 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC9.06□□□□□ -0.96
Col8a2P25318 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Col8a2P25318 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC9.06□□□□□ -0.96
Col8a2P25318 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC9.06□□□□□ -0.96
Col8a2P25318 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC9.06□□□□□ -0.96
Col8a2P25318 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC9.06□□□□□ -0.96
Col8a2P25318 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms